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Panel Comparison Table
| Platform |  nCounterLearn more |  GeoMxLearn more |  CosMxLearn more |  CellScapeLearn more |  PaintScapeLearn more |
| Applications | Rapid and robust targeted RNA and multiomic expression proven for translational and clinical studies | Early biomarker discovery through high-throughput, cost-effective and high-plex RNA and protein screening | High sensitive subcellular imaging of the whole transcriptome for pathway-level spatial insights | Flexible subcellular proteomics for rapid and quantitative spatial phenotyping | High precision, multiplexed direct visualization of the 3D genome |
| Analyte | miRNA, RNA, protein | RNA, protein | RNA, protein | Protein, RNA | DNA |
| Plex level | 800+ RNA500+ protein | Targeted RNA assays (up to 2000 targets)Whole transcriptome RNA assaysUp to 1200 proteins | Target RNA assays (up to 6000 targets)Whole transcriptome RNA assaysUp to 64 proteins | Targeted protein assays (up to 34 targets)Customizable assays up to 20 | Targetd DNA Assays (419+ targets) |
| Resolution | Bulk | Multicellular (RNA)Single-cell (protein) | Single-cellSubcellular | Single-cellSubcellular | Single-nuclei |
| Sample compatibility | FFPE, FF, lysate | FFPE, FF | FFPE, FF | FFPE, FF, cell suspension, lysate | Human cell lines, FF tissue (coming soon) |
| Data readout | nCounter (Direct counting) | NGS, nCounter (Direct counting) | Imaging | Imaging | Imaging |