introduction
slides-and-profiling-strategy
experimental-questions
results-overview
overview-of-report-analysis
glomeruli-vs-tubules
normal-vs-diseased-dkd-glomeruli
study-design
quality-control-summary
segment-qc
probe-qc
limit-of-quantification
loq-based-segment-filtering
loq-based-gene-filtering
normalization
exploratory-data-analysis
dimensional-reduction
clustering-features-with-high-coefficient-of-variation
differential-expression
glomeruli-vs-tubules-1
healthy-vs-diseased-dkd-glomeruli
spatial-deconvolution
heatmap-of-cell-abundance
differential-abundance-of-cell-types
glomeruli-vs-tubules-2
healthy-vs-diseased-dkd-glomeruli-1
pathway-analysis
scoring-gene-sets
glomeruli-vs-tubules-3
differential-enrichment
results-table
healthy-vs-diseased-dkd-glomeruli-2
differential-enrichment-1
results-table-1
downloads-appendix
sample-intake-appendix
annotation-distributions
correlations-among-factors-of-interest
qc-appendix
segment-qc-details
qc-parameters-used-in-this-study
non-template-control-counts
segment-qc-plots
normalization---evaluation-of-signal-intensity
contrasting-groups-with-linear-mixed-models
r-information
spatial-deconvolution-appendix
cell-profile-matrix
pathway-analysis-appendix
contrast-1-tubule-vs-glomerulus
contrast-2-normal-vs-dkd
